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Cluster: MGYG000003543.1_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003543.1_23 MGYG000003543.1_23_2 615 3929 - 3.A.5.1.1
CAZyme MGYG000003543.1_23 MGYG000003543.1_23_3 4249 6126 + GH110
pfam MGYG000003543.1_23 MGYG000003543.1_23_4 6126 7769 + PseudoU_synth_2
CAZyme MGYG000003543.1_23 MGYG000003543.1_23_5 7843 12834 + GH123 | GH33
pfam MGYG000003543.1_23 MGYG000003543.1_23_6 12925 13542 - TPK_catalytic | Thi_PPkinase_C
TC MGYG000003543.1_23 MGYG000003543.1_23_7 13532 14116 - 4.B.1.1.4
TC MGYG000003543.1_23 MGYG000003543.1_23_8 14214 16445 - 1.B.14.14.1
TC MGYG000003543.1_23 MGYG000003543.1_23_9 16951 17901 + 2.A.19.5.2
Gene ID: MGYG000003543.1_23_2
Type: TC
Location: 615 - 3929 (-)
Gene ID: MGYG000003543.1_23_3
Type: CAZyme
Location: 4249 - 6126 (+)
Gene ID: MGYG000003543.1_23_4
Type: pfam
Location: 6126 - 7769 (+)
Gene ID: MGYG000003543.1_23_5
Type: CAZyme
Location: 7843 - 12834 (+)
Gene ID: MGYG000003543.1_23_6
Type: pfam
Location: 12925 - 13542 (-)
Gene ID: MGYG000003543.1_23_7
Type: TC
Location: 13532 - 14116 (-)
Gene ID: MGYG000003543.1_23_8
Type: TC
Location: 14214 - 16445 (-)
Gene ID: MGYG000003543.1_23_9
Type: TC
Location: 16951 - 17901 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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