Cluster: MGYG000003539_CGC8
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000003539
- CGC Family ID: CGCFAM_00002
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003539_24 | MGYG000003539_24_339 | 373877 | 375082 | + | GT4 |
| pfam | MGYG000003539_24 | MGYG000003539_24_340 | 375084 | 375476 | + | Acyl_transf_3 |
| CAZyme | MGYG000003539_24 | MGYG000003539_24_341 | 376090 | 376833 | + | GT32 |
| pfam | MGYG000003539_24 | MGYG000003539_24_342 | 376843 | 377955 | + | EpsG |
| CAZyme | MGYG000003539_24 | MGYG000003539_24_343 | 377965 | 378864 | + | GT2 |
| pfam | MGYG000003539_24 | MGYG000003539_24_344 | 378868 | 379419 | + | Hexapep |
| CAZyme | MGYG000003539_24 | MGYG000003539_24_345 | 379423 | 380493 | + | GT4 |
| CAZyme | MGYG000003539_24 | MGYG000003539_24_346 | 380486 | 381610 | + | GT4 |
| TC | MGYG000003539_24 | MGYG000003539_24_347 | 381617 | 382231 | + | 9.B.18.1.2 |
Gene ID: MGYG000003539_24_339
Type: CAZyme
Location: 373877 - 375082 (+)
Type: CAZyme
Location: 373877 - 375082 (+)
Gene ID: MGYG000003539_24_340
Type: pfam
Location: 375084 - 375476 (+)
Type: pfam
Location: 375084 - 375476 (+)
Gene ID: MGYG000003539_24_341
Type: CAZyme
Location: 376090 - 376833 (+)
Type: CAZyme
Location: 376090 - 376833 (+)
Gene ID: MGYG000003539_24_342
Type: pfam
Location: 376843 - 377955 (+)
Type: pfam
Location: 376843 - 377955 (+)
Gene ID: MGYG000003539_24_343
Type: CAZyme
Location: 377965 - 378864 (+)
Type: CAZyme
Location: 377965 - 378864 (+)
Gene ID: MGYG000003539_24_344
Type: pfam
Location: 378868 - 379419 (+)
Type: pfam
Location: 378868 - 379419 (+)
Gene ID: MGYG000003539_24_345
Type: CAZyme
Location: 379423 - 380493 (+)
Type: CAZyme
Location: 379423 - 380493 (+)
Gene ID: MGYG000003539_24_346
Type: CAZyme
Location: 380486 - 381610 (+)
Type: CAZyme
Location: 380486 - 381610 (+)
Gene ID: MGYG000003539_24_347
Type: TC
Location: 381617 - 382231 (+)
Type: TC
Location: 381617 - 382231 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp900769405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.