Cluster: MGYG000003539_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003539
- CGC Family ID: CGCFAM_10961
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003539_30 | MGYG000003539_30_15 | 20970 | 22892 | - | GH84 |
| TC | MGYG000003539_30 | MGYG000003539_30_16 | 23080 | 25716 | + | 3.A.3.2.21 |
| pfam | MGYG000003539_30 | MGYG000003539_30_17 | 25852 | 26700 | + | ResB |
| TC | MGYG000003539_30 | MGYG000003539_30_18 | 26697 | 27464 | + | 9.B.14.3.3 |
| TC | MGYG000003539_30 | MGYG000003539_30_19 | 27484 | 28863 | + | 5.B.3.1.1 |
Gene ID: MGYG000003539_30_15
Type: CAZyme
Location: 20970 - 22892 (-)
Type: CAZyme
Location: 20970 - 22892 (-)
Gene ID: MGYG000003539_30_16
Type: TC
Location: 23080 - 25716 (+)
Type: TC
Location: 23080 - 25716 (+)
Gene ID: MGYG000003539_30_17
Type: pfam
Location: 25852 - 26700 (+)
Type: pfam
Location: 25852 - 26700 (+)
Gene ID: MGYG000003539_30_18
Type: TC
Location: 26697 - 27464 (+)
Type: TC
Location: 26697 - 27464 (+)
Gene ID: MGYG000003539_30_19
Type: TC
Location: 27484 - 28863 (+)
Type: TC
Location: 27484 - 28863 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp900769405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.