Cluster: MGYG000003539_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003539
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003539_8 | MGYG000003539_8_60 | 62447 | 63673 | + | GH171 |
| CAZyme | MGYG000003539_8 | MGYG000003539_8_61 | 63710 | 65497 | + | GH9 |
| pfam | MGYG000003539_8 | MGYG000003539_8_62 | 65545 | 66195 | + | Polysacc_deac_1 |
| pfam | MGYG000003539_8 | MGYG000003539_8_63 | 66525 | 68306 | + | tRNA-synt_1d | Arg_tRNA_synt_N | DALR_1 |
| TC | MGYG000003539_8 | MGYG000003539_8_64 | 68452 | 69312 | - | 3.A.2.1.6 |
| TC | MGYG000003539_8 | MGYG000003539_8_65 | 69317 | 70897 | - | 3.A.2.1.2 |
Gene ID: MGYG000003539_8_60
Type: CAZyme
Location: 62447 - 63673 (+)
Type: CAZyme
Location: 62447 - 63673 (+)
Gene ID: MGYG000003539_8_61
Type: CAZyme
Location: 63710 - 65497 (+)
Type: CAZyme
Location: 63710 - 65497 (+)
Gene ID: MGYG000003539_8_62
Type: pfam
Location: 65545 - 66195 (+)
Type: pfam
Location: 65545 - 66195 (+)
Gene ID: MGYG000003539_8_63
Type: pfam
Location: 66525 - 68306 (+)
Type: pfam
Location: 66525 - 68306 (+)
Gene ID: MGYG000003539_8_64
Type: TC
Location: 68452 - 69312 (-)
Type: TC
Location: 68452 - 69312 (-)
Gene ID: MGYG000003539_8_65
Type: TC
Location: 69317 - 70897 (-)
Type: TC
Location: 69317 - 70897 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp900769405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.