Cluster: MGYG000003534_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003534
- CGC Family ID: CGCFAM_01618
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003534_35 | MGYG000003534_35_3 | 2315 | 4069 | - | GH13_36 |
| TC | MGYG000003534_35 | MGYG000003534_35_4 | 4180 | 5283 | - | 3.A.1.1.6 |
| TC | MGYG000003534_35 | MGYG000003534_35_5 | 5283 | 7703 | - | 3.A.1.1.6 |
| TC | MGYG000003534_35 | MGYG000003534_35_6 | 7800 | 8978 | - | 3.A.1.1.16 |
| NULL(UNKNOWN) | MGYG000003534_35 | MGYG000003534_35_7 | 9415 | 9840 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | MGYG000003534_35 | MGYG000003534_35_8 | 10109 | 11140 | + | Pribosyltran |
| TC | MGYG000003534_35 | MGYG000003534_35_9 | 11262 | 12602 | + | 2.A.40.1.4 |
Gene ID: MGYG000003534_35_3
Type: CAZyme
Location: 2315 - 4069 (-)
Type: CAZyme
Location: 2315 - 4069 (-)
Gene ID: MGYG000003534_35_4
Type: TC
Location: 4180 - 5283 (-)
Type: TC
Location: 4180 - 5283 (-)
Gene ID: MGYG000003534_35_5
Type: TC
Location: 5283 - 7703 (-)
Type: TC
Location: 5283 - 7703 (-)
Gene ID: MGYG000003534_35_6
Type: TC
Location: 7800 - 8978 (-)
Type: TC
Location: 7800 - 8978 (-)
Gene ID: MGYG000003534_35_7
Type:
Location: 9415 - 9840 (-)
Type:
Location: 9415 - 9840 (-)
Gene ID: MGYG000003534_35_8
Type: STP
Location: 10109 - 11140 (+)
Type: STP
Location: 10109 - 11140 (+)
Gene ID: MGYG000003534_35_9
Type: TC
Location: 11262 - 12602 (+)
Type: TC
Location: 11262 - 12602 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900769325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.