Cluster: MGYG000003534_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003534
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003534_30 | MGYG000003534_30_10 | 8055 | 9302 | - | 3.A.5.1.1 |
| TC | MGYG000003534_30 | MGYG000003534_30_11 | 9321 | 11456 | - | 1.A.104.1.1 |
| pfam | MGYG000003534_30 | MGYG000003534_30_12 | 11695 | 12861 | + | ThiI | THUMP | ThiI_fer |
| CAZyme | MGYG000003534_30 | MGYG000003534_30_13 | 12839 | 13972 | - | GT28 |
| NULL(UNKNOWN) | MGYG000003534_30 | MGYG000003534_30_14 | 13985 | 15670 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000003534_30 | MGYG000003534_30_15 | 15736 | 16458 | + | UDG |
| TC | MGYG000003534_30 | MGYG000003534_30_16 | 16468 | 18468 | + | 3.A.11.3.1 |
Gene ID: MGYG000003534_30_10
Type: TC
Location: 8055 - 9302 (-)
Type: TC
Location: 8055 - 9302 (-)
Gene ID: MGYG000003534_30_11
Type: TC
Location: 9321 - 11456 (-)
Type: TC
Location: 9321 - 11456 (-)
Gene ID: MGYG000003534_30_12
Type: pfam
Location: 11695 - 12861 (+)
Type: pfam
Location: 11695 - 12861 (+)
Gene ID: MGYG000003534_30_13
Type: CAZyme
Location: 12839 - 13972 (-)
Type: CAZyme
Location: 12839 - 13972 (-)
Gene ID: MGYG000003534_30_14
Type:
Location: 13985 - 15670 (-)
Type:
Location: 13985 - 15670 (-)
Gene ID: MGYG000003534_30_15
Type: pfam
Location: 15736 - 16458 (+)
Type: pfam
Location: 15736 - 16458 (+)
Gene ID: MGYG000003534_30_16
Type: TC
Location: 16468 - 18468 (+)
Type: TC
Location: 16468 - 18468 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900769325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.