Cluster: MGYG000003534_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003534
- CGC Family ID: CGCFAM_00729
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003534_26 | MGYG000003534_26_7 | 8164 | 9021 | + | 3.A.1.7.5 |
| TC | MGYG000003534_26 | MGYG000003534_26_8 | 9023 | 9856 | + | 3.A.1.7.5 |
| TC | MGYG000003534_26 | MGYG000003534_26_9 | 9889 | 10650 | + | 3.A.1.7.5 |
| pfam | MGYG000003534_26 | MGYG000003534_26_10 | 10652 | 11299 | + | PhoU | PhoU |
| NULL(UNKNOWN) | MGYG000003534_26 | MGYG000003534_26_11 | 11296 | 12033 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003534_26 | MGYG000003534_26_12 | 12196 | 14169 | + | GH13_14 |
Gene ID: MGYG000003534_26_7
Type: TC
Location: 8164 - 9021 (+)
Type: TC
Location: 8164 - 9021 (+)
Gene ID: MGYG000003534_26_8
Type: TC
Location: 9023 - 9856 (+)
Type: TC
Location: 9023 - 9856 (+)
Gene ID: MGYG000003534_26_9
Type: TC
Location: 9889 - 10650 (+)
Type: TC
Location: 9889 - 10650 (+)
Gene ID: MGYG000003534_26_10
Type: pfam
Location: 10652 - 11299 (+)
Type: pfam
Location: 10652 - 11299 (+)
Gene ID: MGYG000003534_26_11
Type:
Location: 11296 - 12033 (-)
Type:
Location: 11296 - 12033 (-)
Gene ID: MGYG000003534_26_12
Type: CAZyme
Location: 12196 - 14169 (+)
Type: CAZyme
Location: 12196 - 14169 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900769325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.