Cluster: MGYG000003534_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003534
- CGC Family ID: CGCFAM_00002
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003534_138 | MGYG000003534_138_23 | 26847 | 27767 | + | GT2 |
| NULL(UNKNOWN) | MGYG000003534_138 | MGYG000003534_138_24 | 27757 | 28143 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003534_138 | MGYG000003534_138_25 | 28136 | 28474 | + | 2.A.7.33.5 |
| NULL(UNKNOWN) | MGYG000003534_138 | MGYG000003534_138_26 | 28502 | 30331 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003534_138 | MGYG000003534_138_27 | 30347 | 31423 | + | GT4 |
Gene ID: MGYG000003534_138_23
Type: CAZyme
Location: 26847 - 27767 (+)
Type: CAZyme
Location: 26847 - 27767 (+)
Gene ID: MGYG000003534_138_24
Type:
Location: 27757 - 28143 (+)
Type:
Location: 27757 - 28143 (+)
Gene ID: MGYG000003534_138_25
Type: TC
Location: 28136 - 28474 (+)
Type: TC
Location: 28136 - 28474 (+)
Gene ID: MGYG000003534_138_26
Type:
Location: 28502 - 30331 (+)
Type:
Location: 28502 - 30331 (+)
Gene ID: MGYG000003534_138_27
Type: CAZyme
Location: 30347 - 31423 (+)
Type: CAZyme
Location: 30347 - 31423 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900769325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.