Cluster: MGYG000003534_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003534
- CGC Family ID: CGCFAM_00396
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003534_94 | MGYG000003534_94_47 | 45701 | 46456 | + | GT2 |
| pfam | MGYG000003534_94 | MGYG000003534_94_48 | 46456 | 47442 | + | Lip_A_acyltrans |
| pfam | MGYG000003534_94 | MGYG000003534_94_49 | 47524 | 48144 | + | LolA |
| TC | MGYG000003534_94 | MGYG000003534_94_50 | 48119 | 50791 | + | 2.A.6.8.2 |
| TC | MGYG000003534_94 | MGYG000003534_94_51 | 50858 | 52432 | + | 2.A.21.2.3 |
Gene ID: MGYG000003534_94_47
Type: CAZyme
Location: 45701 - 46456 (+)
Type: CAZyme
Location: 45701 - 46456 (+)
Gene ID: MGYG000003534_94_48
Type: pfam
Location: 46456 - 47442 (+)
Type: pfam
Location: 46456 - 47442 (+)
Gene ID: MGYG000003534_94_49
Type: pfam
Location: 47524 - 48144 (+)
Type: pfam
Location: 47524 - 48144 (+)
Gene ID: MGYG000003534_94_50
Type: TC
Location: 48119 - 50791 (+)
Type: TC
Location: 48119 - 50791 (+)
Gene ID: MGYG000003534_94_51
Type: TC
Location: 50858 - 52432 (+)
Type: TC
Location: 50858 - 52432 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900769325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.