Cluster: MGYG000003534_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003534
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003534_84 | MGYG000003534_84_24 | 26665 | 27444 | + | 3.A.1.3.29 |
| TC | MGYG000003534_84 | MGYG000003534_84_25 | 27592 | 28299 | + | 3.A.1.3.15 |
| TC | MGYG000003534_84 | MGYG000003534_84_26 | 28384 | 29142 | + | 3.A.1.3.12 |
| CAZyme | MGYG000003534_84 | MGYG000003534_84_27 | 29204 | 30352 | + | GT28 |
Gene ID: MGYG000003534_84_24
Type: TC
Location: 26665 - 27444 (+)
Type: TC
Location: 26665 - 27444 (+)
Gene ID: MGYG000003534_84_25
Type: TC
Location: 27592 - 28299 (+)
Type: TC
Location: 27592 - 28299 (+)
Gene ID: MGYG000003534_84_26
Type: TC
Location: 28384 - 29142 (+)
Type: TC
Location: 28384 - 29142 (+)
Gene ID: MGYG000003534_84_27
Type: CAZyme
Location: 29204 - 30352 (+)
Type: CAZyme
Location: 29204 - 30352 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900769325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.