Cluster: MGYG000003534_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003534
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003534_77 | MGYG000003534_77_62 | 68174 | 69538 | - | 2.A.66.1.33 |
| TF | MGYG000003534_77 | MGYG000003534_77_63 | 69814 | 70152 | + | HTH_3 |
| TC | MGYG000003534_77 | MGYG000003534_77_64 | 70279 | 71523 | + | 2.A.81.2.2 |
| CAZyme | MGYG000003534_77 | MGYG000003534_77_65 | 71595 | 72731 | - | GT4 |
| TC | MGYG000003534_77 | MGYG000003534_77_66 | 72779 | 73903 | + | 3.A.18.1.1 |
Gene ID: MGYG000003534_77_62
Type: TC
Location: 68174 - 69538 (-)
Type: TC
Location: 68174 - 69538 (-)
Gene ID: MGYG000003534_77_63
Type: TF
Location: 69814 - 70152 (+)
Type: TF
Location: 69814 - 70152 (+)
Gene ID: MGYG000003534_77_64
Type: TC
Location: 70279 - 71523 (+)
Type: TC
Location: 70279 - 71523 (+)
Gene ID: MGYG000003534_77_65
Type: CAZyme
Location: 71595 - 72731 (-)
Type: CAZyme
Location: 71595 - 72731 (-)
Gene ID: MGYG000003534_77_66
Type: TC
Location: 72779 - 73903 (+)
Type: TC
Location: 72779 - 73903 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900769325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.