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Cluster: MGYG000003525_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003525_12 MGYG000003525_12_54 76461 79661 - 1.B.14.6.1
CAZyme MGYG000003525_12 MGYG000003525_12_55 79690 81624 - PL1_2
CAZyme MGYG000003525_12 MGYG000003525_12_56 81653 83866 - CE8 | GH105
CAZyme MGYG000003525_12 MGYG000003525_12_57 83868 85436 - GH28
TC MGYG000003525_12 MGYG000003525_12_58 85564 85926 + 9.B.55.2.1
STP MGYG000003525_12 MGYG000003525_12_59 86024 86635 + TetR_N
pfam MGYG000003525_12 MGYG000003525_12_60 86640 87923 + OEP | OEP
TC MGYG000003525_12 MGYG000003525_12_61 87938 88837 + 3.A.1.105.16
TC MGYG000003525_12 MGYG000003525_12_62 88848 89756 + 3.A.1.105.15
TC MGYG000003525_12 MGYG000003525_12_63 89759 90505 + 3.A.1.105.4
TC MGYG000003525_12 MGYG000003525_12_64 90502 91581 + 3.A.1.105.15
TC MGYG000003525_12 MGYG000003525_12_65 91583 92689 + 3.A.1.105.15
Gene ID: MGYG000003525_12_54
Type: TC
Location: 76461 - 79661 (-)
Gene ID: MGYG000003525_12_55
Type: CAZyme
Location: 79690 - 81624 (-)
Gene ID: MGYG000003525_12_56
Type: CAZyme
Location: 81653 - 83866 (-)
Gene ID: MGYG000003525_12_57
Type: CAZyme
Location: 83868 - 85436 (-)
Gene ID: MGYG000003525_12_58
Type: TC
Location: 85564 - 85926 (+)
Gene ID: MGYG000003525_12_59
Type: STP
Location: 86024 - 86635 (+)
Gene ID: MGYG000003525_12_60
Type: pfam
Location: 86640 - 87923 (+)
Gene ID: MGYG000003525_12_61
Type: TC
Location: 87938 - 88837 (+)
Gene ID: MGYG000003525_12_62
Type: TC
Location: 88848 - 89756 (+)
Gene ID: MGYG000003525_12_63
Type: TC
Location: 89759 - 90505 (+)
Gene ID: MGYG000003525_12_64
Type: TC
Location: 90502 - 91581 (+)
Gene ID: MGYG000003525_12_65
Type: TC
Location: 91583 - 92689 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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