Cluster: MGYG000003517_CGC25
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000003517
- CGC Family ID: CGCFAM_00009
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003517_259 | MGYG000003517_259_2 | 313 | 2319 | - | GT2 |
| pfam | MGYG000003517_259 | MGYG000003517_259_3 | 2378 | 4417 | - | PCMT | Methyltransf_11 | Methyltransf_12 | Methyltransf_25 |
| TC | MGYG000003517_259 | MGYG000003517_259_4 | 4568 | 5857 | - | 3.A.1.103.6 |
| TC | MGYG000003517_259 | MGYG000003517_259_5 | 5929 | 6921 | - | 3.A.1.104.1 |
| CAZyme | MGYG000003517_259 | MGYG000003517_259_6 | 6924 | 8171 | - | GH25 |
| CAZyme | MGYG000003517_259 | MGYG000003517_259_7 | 8343 | 9374 | - | GT2 |
| CAZyme | MGYG000003517_259 | MGYG000003517_259_8 | 9449 | 12706 | - | GH25 |
| NULL(UNKNOWN) | MGYG000003517_259 | MGYG000003517_259_9 | 12840 | 13856 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003517_259 | MGYG000003517_259_10 | 13894 | 14829 | - | GT2 |
| pfam | MGYG000003517_259 | MGYG000003517_259_11 | 14826 | 16175 | - | NTP_transferase | MannoseP_isomer |
| CAZyme | MGYG000003517_259 | MGYG000003517_259_12 | 16244 | 16993 | - | GT2 |
Gene ID: MGYG000003517_259_2
Type: CAZyme
Location: 313 - 2319 (-)
Type: CAZyme
Location: 313 - 2319 (-)
Gene ID: MGYG000003517_259_3
Type: pfam
Location: 2378 - 4417 (-)
Type: pfam
Location: 2378 - 4417 (-)
Gene ID: MGYG000003517_259_4
Type: TC
Location: 4568 - 5857 (-)
Type: TC
Location: 4568 - 5857 (-)
Gene ID: MGYG000003517_259_5
Type: TC
Location: 5929 - 6921 (-)
Type: TC
Location: 5929 - 6921 (-)
Gene ID: MGYG000003517_259_6
Type: CAZyme
Location: 6924 - 8171 (-)
Type: CAZyme
Location: 6924 - 8171 (-)
Gene ID: MGYG000003517_259_7
Type: CAZyme
Location: 8343 - 9374 (-)
Type: CAZyme
Location: 8343 - 9374 (-)
Gene ID: MGYG000003517_259_8
Type: CAZyme
Location: 9449 - 12706 (-)
Type: CAZyme
Location: 9449 - 12706 (-)
Gene ID: MGYG000003517_259_9
Type:
Location: 12840 - 13856 (-)
Type:
Location: 12840 - 13856 (-)
Gene ID: MGYG000003517_259_10
Type: CAZyme
Location: 13894 - 14829 (-)
Type: CAZyme
Location: 13894 - 14829 (-)
Gene ID: MGYG000003517_259_11
Type: pfam
Location: 14826 - 16175 (-)
Type: pfam
Location: 14826 - 16175 (-)
Gene ID: MGYG000003517_259_12
Type: CAZyme
Location: 16244 - 16993 (-)
Type: CAZyme
Location: 16244 - 16993 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3766
Species
UBA3766 sp900769175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.