Cluster: MGYG000003516_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003516
- CGC Family ID: CGCFAM_01527
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003516_265 | MGYG000003516_265_2 | 150 | 461 | + | 3.A.1.23.8 |
| TC | MGYG000003516_265 | MGYG000003516_265_3 | 504 | 1217 | + | 3.A.1.23.2 |
| TC | MGYG000003516_265 | MGYG000003516_265_4 | 1195 | 2028 | + | 3.A.1.23.2 |
| pfam | MGYG000003516_265 | MGYG000003516_265_5 | 2117 | 2575 | + | DMRL_synthase |
| CAZyme | MGYG000003516_265 | MGYG000003516_265_6 | 2587 | 3009 | + | GT2 |
Gene ID: MGYG000003516_265_2
Type: TC
Location: 150 - 461 (+)
Type: TC
Location: 150 - 461 (+)
Gene ID: MGYG000003516_265_3
Type: TC
Location: 504 - 1217 (+)
Type: TC
Location: 504 - 1217 (+)
Gene ID: MGYG000003516_265_4
Type: TC
Location: 1195 - 2028 (+)
Type: TC
Location: 1195 - 2028 (+)
Gene ID: MGYG000003516_265_5
Type: pfam
Location: 2117 - 2575 (+)
Type: pfam
Location: 2117 - 2575 (+)
Gene ID: MGYG000003516_265_6
Type: CAZyme
Location: 2587 - 3009 (+)
Type: CAZyme
Location: 2587 - 3009 (+)
Taxonomic Lineage
Domain
Archaea
Phylum
Methanobacteriota
Class
Methanobacteria
Order
Methanobacteriales
Family
Methanobacteriaceae
Genus
Methanobrevibacter_A
Species
Methanobrevibacter_A sp900769095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003516_265_5 | vegan > vegetarian | 23.66098 | 0.03894 |