Cluster: MGYG000003516_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003516
- CGC Family ID: CGCFAM_00008
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003516_155 | MGYG000003516_155_2 | 503 | 1309 | + | 2.A.49.6.1 |
| pfam | MGYG000003516_155 | MGYG000003516_155_3 | 1310 | 1597 | + | PRA-PH |
| TC | MGYG000003516_155 | MGYG000003516_155_4 | 1621 | 2385 | + | 3.A.1.103.6 |
| TC | MGYG000003516_155 | MGYG000003516_155_5 | 2395 | 3825 | + | 3.A.1.103.1 |
| NULL(UNKNOWN) | MGYG000003516_155 | MGYG000003516_155_6 | 3836 | 4345 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003516_155 | MGYG000003516_155_7 | 4358 | 6628 | + | GT2 |
Gene ID: MGYG000003516_155_2
Type: TC
Location: 503 - 1309 (+)
Type: TC
Location: 503 - 1309 (+)
Gene ID: MGYG000003516_155_3
Type: pfam
Location: 1310 - 1597 (+)
Type: pfam
Location: 1310 - 1597 (+)
Gene ID: MGYG000003516_155_4
Type: TC
Location: 1621 - 2385 (+)
Type: TC
Location: 1621 - 2385 (+)
Gene ID: MGYG000003516_155_5
Type: TC
Location: 2395 - 3825 (+)
Type: TC
Location: 2395 - 3825 (+)
Gene ID: MGYG000003516_155_6
Type:
Location: 3836 - 4345 (+)
Type:
Location: 3836 - 4345 (+)
Gene ID: MGYG000003516_155_7
Type: CAZyme
Location: 4358 - 6628 (+)
Type: CAZyme
Location: 4358 - 6628 (+)
Taxonomic Lineage
Domain
Archaea
Phylum
Methanobacteriota
Class
Methanobacteria
Order
Methanobacteriales
Family
Methanobacteriaceae
Genus
Methanobrevibacter_A
Species
Methanobrevibacter_A sp900769095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.