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Cluster: MGYG000003512_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003512_90 MGYG000003512_90_3 2169 3794 + 1.I.1.1.3
TC MGYG000003512_90 MGYG000003512_90_4 3919 5106 + 9.B.10.1.1
pfam MGYG000003512_90 MGYG000003512_90_5 5103 6065 + cobW | DUF1980_C
pfam MGYG000003512_90 MGYG000003512_90_6 6165 7229 + APH
TC MGYG000003512_90 MGYG000003512_90_7 7403 8527 - 3.A.1.1.22
TC MGYG000003512_90 MGYG000003512_90_8 8581 9738 - 3.A.1.1.27
TC MGYG000003512_90 MGYG000003512_90_9 9738 11474 - 3.A.1.1.27
pfam MGYG000003512_90 MGYG000003512_90_10 11634 12836 - SBP_bac_8
pfam MGYG000003512_90 MGYG000003512_90_11 13043 13312 - VEG
CAZyme MGYG000003512_90 MGYG000003512_90_12 13494 15422 - CBM61 | GH53
pfam MGYG000003512_90 MGYG000003512_90_13 15469 15900 - Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10
CAZyme MGYG000003512_90 MGYG000003512_90_14 15937 17112 - GH177
pfam MGYG000003512_90 MGYG000003512_90_15 17141 17893 - AP_endonuc_2
NULL(UNKNOWN) MGYG000003512_90 MGYG000003512_90_16 17907 19139 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000003512_90 MGYG000003512_90_17 19161 20501 - GH43_35
sulfatase MGYG000003512_90 MGYG000003512_90_18 20753 21487 + S1_9
TC MGYG000003512_90 MGYG000003512_90_19 21751 22830 - 3.A.1.1.26
Gene ID: MGYG000003512_90_3
Type: TC
Location: 2169 - 3794 (+)
Gene ID: MGYG000003512_90_4
Type: TC
Location: 3919 - 5106 (+)
Gene ID: MGYG000003512_90_5
Type: pfam
Location: 5103 - 6065 (+)
Gene ID: MGYG000003512_90_6
Type: pfam
Location: 6165 - 7229 (+)
Gene ID: MGYG000003512_90_7
Type: TC
Location: 7403 - 8527 (-)
Gene ID: MGYG000003512_90_8
Type: TC
Location: 8581 - 9738 (-)
Gene ID: MGYG000003512_90_9
Type: TC
Location: 9738 - 11474 (-)
Gene ID: MGYG000003512_90_10
Type: pfam
Location: 11634 - 12836 (-)
Gene ID: MGYG000003512_90_11
Type: pfam
Location: 13043 - 13312 (-)
Gene ID: MGYG000003512_90_12
Type: CAZyme
Location: 13494 - 15422 (-)
Gene ID: MGYG000003512_90_13
Type: pfam
Location: 15469 - 15900 (-)
Gene ID: MGYG000003512_90_14
Type: CAZyme
Location: 15937 - 17112 (-)
Gene ID: MGYG000003512_90_15
Type: pfam
Location: 17141 - 17893 (-)
Gene ID: MGYG000003512_90_16
Type:
Location: 17907 - 19139 (-)
Gene ID: MGYG000003512_90_17
Type: CAZyme
Location: 19161 - 20501 (-)
Gene ID: MGYG000003512_90_18
Type: sulfatase
Location: 20753 - 21487 (+)
Gene ID: MGYG000003512_90_19
Type: TC
Location: 21751 - 22830 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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