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Cluster: MGYG000003512_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003512_3 MGYG000003512_3_15 14185 15816 - 3.A.1.1.10
TC MGYG000003512_3 MGYG000003512_3_16 15894 16820 - 3.A.1.1.29
TC MGYG000003512_3 MGYG000003512_3_17 16840 17793 - 3.A.1.1.10
TC MGYG000003512_3 MGYG000003512_3_18 18238 19431 + 2.A.1.65.8
NULL(UNKNOWN) MGYG000003512_3 MGYG000003512_3_19 19447 21153 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000003512_3 MGYG000003512_3_20 21234 22286 + GH105
NULL(UNKNOWN) MGYG000003512_3 MGYG000003512_3_21 22338 22757 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000003512_3 MGYG000003512_3_22 22774 24660 - GH51_2
CAZyme MGYG000003512_3 MGYG000003512_3_23 24676 26154 - GH29
CAZyme MGYG000003512_3 MGYG000003512_3_24 26201 27619 - GH29
CAZyme MGYG000003512_3 MGYG000003512_3_25 27595 30654 - GH38
TF MGYG000003512_3 MGYG000003512_3_26 30681 31445 - HTH_DeoR
NULL(UNKNOWN) MGYG000003512_3 MGYG000003512_3_27 31744 33405 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000003512_3 MGYG000003512_3_28 33468 35330 + 3.A.1.5.12
TC MGYG000003512_3 MGYG000003512_3_29 35451 36506 + 3.A.1.5.29
TC MGYG000003512_3 MGYG000003512_3_30 36512 37645 + 3.A.1.5.29
TC MGYG000003512_3 MGYG000003512_3_31 37741 38769 + 3.A.1.5.29
TC MGYG000003512_3 MGYG000003512_3_32 38762 39778 + 3.A.1.5.12
pfam MGYG000003512_3 MGYG000003512_3_33 39817 40749 + AP_endonuc_2
pfam MGYG000003512_3 MGYG000003512_3_34 41097 41495 + AadA_C
CAZyme MGYG000003512_3 MGYG000003512_3_35 41554 44466 + GH38
Gene ID: MGYG000003512_3_15
Type: TC
Location: 14185 - 15816 (-)
Gene ID: MGYG000003512_3_16
Type: TC
Location: 15894 - 16820 (-)
Gene ID: MGYG000003512_3_17
Type: TC
Location: 16840 - 17793 (-)
Gene ID: MGYG000003512_3_18
Type: TC
Location: 18238 - 19431 (+)
Gene ID: MGYG000003512_3_19
Type:
Location: 19447 - 21153 (+)
Gene ID: MGYG000003512_3_20
Type: CAZyme
Location: 21234 - 22286 (+)
Gene ID: MGYG000003512_3_21
Type:
Location: 22338 - 22757 (-)
Gene ID: MGYG000003512_3_22
Type: CAZyme
Location: 22774 - 24660 (-)
Gene ID: MGYG000003512_3_23
Type: CAZyme
Location: 24676 - 26154 (-)
Gene ID: MGYG000003512_3_24
Type: CAZyme
Location: 26201 - 27619 (-)
Gene ID: MGYG000003512_3_25
Type: CAZyme
Location: 27595 - 30654 (-)
Gene ID: MGYG000003512_3_26
Type: TF
Location: 30681 - 31445 (-)
Gene ID: MGYG000003512_3_27
Type:
Location: 31744 - 33405 (+)
Gene ID: MGYG000003512_3_28
Type: TC
Location: 33468 - 35330 (+)
Gene ID: MGYG000003512_3_29
Type: TC
Location: 35451 - 36506 (+)
Gene ID: MGYG000003512_3_30
Type: TC
Location: 36512 - 37645 (+)
Gene ID: MGYG000003512_3_31
Type: TC
Location: 37741 - 38769 (+)
Gene ID: MGYG000003512_3_32
Type: TC
Location: 38762 - 39778 (+)
Gene ID: MGYG000003512_3_33
Type: pfam
Location: 39817 - 40749 (+)
Gene ID: MGYG000003512_3_34
Type: pfam
Location: 41097 - 41495 (+)
Gene ID: MGYG000003512_3_35
Type: CAZyme
Location: 41554 - 44466 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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