Cluster: MGYG000003496_CGC1
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003496
- CGC Family ID: CGCFAM_05097
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003496_3 | MGYG000003496_3_19 | 18589 | 20202 | - | GH26 |
| pfam | MGYG000003496_3 | MGYG000003496_3_20 | 20302 | 22335 | - | FtsA |
| TC | MGYG000003496_3 | MGYG000003496_3_21 | 22370 | 23032 | - | 3.A.3.1.8 |
| pfam | MGYG000003496_3 | MGYG000003496_3_22 | 23065 | 23685 | - | TrkA_N |
| pfam | MGYG000003496_3 | MGYG000003496_3_23 | 23723 | 25081 | - | MMR_HSR1 | FeoB_N | TrmE_N | MnmE_helical |
| TC | MGYG000003496_3 | MGYG000003496_3_24 | 25087 | 27375 | - | 3.A.5.2.2 |
| STP | MGYG000003496_3 | MGYG000003496_3_25 | 27406 | 27936 | - | NUDIX |
| CAZyme | MGYG000003496_3 | MGYG000003496_3_26 | 27936 | 29126 | - | GH130_1 |
| pfam | MGYG000003496_3 | MGYG000003496_3_27 | 29303 | 29956 | + | Hydrolase | HAD | Hydrolase_like | HAD_2 |
| pfam | MGYG000003496_3 | MGYG000003496_3_28 | 29963 | 30340 | - | SpoVAC_SpoVAEB |
| TC | MGYG000003496_3 | MGYG000003496_3_29 | 30356 | 31360 | - | 9.A.11.1.1 |
| TC | MGYG000003496_3 | MGYG000003496_3_30 | 31364 | 31786 | - | 9.A.11.1.1 |
Gene ID: MGYG000003496_3_19
Type: CAZyme
Location: 18589 - 20202 (-)
Type: CAZyme
Location: 18589 - 20202 (-)
Gene ID: MGYG000003496_3_20
Type: pfam
Location: 20302 - 22335 (-)
Type: pfam
Location: 20302 - 22335 (-)
Gene ID: MGYG000003496_3_21
Type: TC
Location: 22370 - 23032 (-)
Type: TC
Location: 22370 - 23032 (-)
Gene ID: MGYG000003496_3_22
Type: pfam
Location: 23065 - 23685 (-)
Type: pfam
Location: 23065 - 23685 (-)
Gene ID: MGYG000003496_3_23
Type: pfam
Location: 23723 - 25081 (-)
Type: pfam
Location: 23723 - 25081 (-)
Gene ID: MGYG000003496_3_24
Type: TC
Location: 25087 - 27375 (-)
Type: TC
Location: 25087 - 27375 (-)
Gene ID: MGYG000003496_3_25
Type: STP
Location: 27406 - 27936 (-)
Type: STP
Location: 27406 - 27936 (-)
Gene ID: MGYG000003496_3_26
Type: CAZyme
Location: 27936 - 29126 (-)
Type: CAZyme
Location: 27936 - 29126 (-)
Gene ID: MGYG000003496_3_27
Type: pfam
Location: 29303 - 29956 (+)
Type: pfam
Location: 29303 - 29956 (+)
Gene ID: MGYG000003496_3_28
Type: pfam
Location: 29963 - 30340 (-)
Type: pfam
Location: 29963 - 30340 (-)
Gene ID: MGYG000003496_3_29
Type: TC
Location: 30356 - 31360 (-)
Type: TC
Location: 30356 - 31360 (-)
Gene ID: MGYG000003496_3_30
Type: TC
Location: 31364 - 31786 (-)
Type: TC
Location: 31364 - 31786 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp900768705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.