Cluster: MGYG000003479_CGC25
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000003479
- CGC Family ID: CGCFAM_04570
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003479_42 | MGYG000003479_42_10 | 9011 | 11062 | - | 3.A.3.6.16 |
| CAZyme | MGYG000003479_42 | MGYG000003479_42_11 | 11194 | 11853 | + | CE3 |
| sulfatase | MGYG000003479_42 | MGYG000003479_42_12 | 11956 | 13599 | - | S1_24 |
| CAZyme | MGYG000003479_42 | MGYG000003479_42_13 | 13711 | 15303 | - | GH142 |
| CAZyme | MGYG000003479_42 | MGYG000003479_42_14 | 15399 | 16856 | - | GH5 |
| TC | MGYG000003479_42 | MGYG000003479_42_15 | 17026 | 18360 | - | 3.A.5.1.1 |
| pfam | MGYG000003479_42 | MGYG000003479_42_16 | 18379 | 19641 | - | tRNA-synt_2b | Seryl_tRNA_N |
| TC | MGYG000003479_42 | MGYG000003479_42_17 | 19775 | 21475 | - | 2.A.53.3.11 |
| NULL(UNKNOWN) | MGYG000003479_42 | MGYG000003479_42_18 | 21472 | 21840 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003479_42 | MGYG000003479_42_19 | 21968 | 23761 | + | GH129 |
Gene ID: MGYG000003479_42_10
Type: TC
Location: 9011 - 11062 (-)
Type: TC
Location: 9011 - 11062 (-)
Gene ID: MGYG000003479_42_11
Type: CAZyme
Location: 11194 - 11853 (+)
Type: CAZyme
Location: 11194 - 11853 (+)
Gene ID: MGYG000003479_42_12
Type: sulfatase
Location: 11956 - 13599 (-)
Type: sulfatase
Location: 11956 - 13599 (-)
Gene ID: MGYG000003479_42_13
Type: CAZyme
Location: 13711 - 15303 (-)
Type: CAZyme
Location: 13711 - 15303 (-)
Gene ID: MGYG000003479_42_14
Type: CAZyme
Location: 15399 - 16856 (-)
Type: CAZyme
Location: 15399 - 16856 (-)
Gene ID: MGYG000003479_42_15
Type: TC
Location: 17026 - 18360 (-)
Type: TC
Location: 17026 - 18360 (-)
Gene ID: MGYG000003479_42_16
Type: pfam
Location: 18379 - 19641 (-)
Type: pfam
Location: 18379 - 19641 (-)
Gene ID: MGYG000003479_42_17
Type: TC
Location: 19775 - 21475 (-)
Type: TC
Location: 19775 - 21475 (-)
Gene ID: MGYG000003479_42_18
Type:
Location: 21472 - 21840 (-)
Type:
Location: 21472 - 21840 (-)
Gene ID: MGYG000003479_42_19
Type: CAZyme
Location: 21968 - 23761 (+)
Type: CAZyme
Location: 21968 - 23761 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp900548275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.