Cluster: MGYG000003479_CGC24
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003479
- CGC Family ID: CGCFAM_10932
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003479_41 | MGYG000003479_41_1 | 3 | 695 | - | 3.D.10.1.2 |
| TC | MGYG000003479_41 | MGYG000003479_41_2 | 714 | 1544 | - | 3.D.10.1.2 |
| CAZyme | MGYG000003479_41 | MGYG000003479_41_3 | 1806 | 3254 | + | GH13 |
| CAZyme | MGYG000003479_41 | MGYG000003479_41_4 | 3388 | 6750 | - | GH106 |
| pfam | MGYG000003479_41 | MGYG000003479_41_5 | 7130 | 7876 | + | adh_short | KR | adh_short_C2 |
| pfam | MGYG000003479_41 | MGYG000003479_41_6 | 7917 | 9317 | + | GFO_IDH_MocA | GFO_IDH_MocA_C2 |
| CAZyme | MGYG000003479_41 | MGYG000003479_41_7 | 9588 | 11759 | + | GH92 |
Gene ID: MGYG000003479_41_1
Type: TC
Location: 3 - 695 (-)
Type: TC
Location: 3 - 695 (-)
Gene ID: MGYG000003479_41_2
Type: TC
Location: 714 - 1544 (-)
Type: TC
Location: 714 - 1544 (-)
Gene ID: MGYG000003479_41_3
Type: CAZyme
Location: 1806 - 3254 (+)
Type: CAZyme
Location: 1806 - 3254 (+)
Gene ID: MGYG000003479_41_4
Type: CAZyme
Location: 3388 - 6750 (-)
Type: CAZyme
Location: 3388 - 6750 (-)
Gene ID: MGYG000003479_41_5
Type: pfam
Location: 7130 - 7876 (+)
Type: pfam
Location: 7130 - 7876 (+)
Gene ID: MGYG000003479_41_6
Type: pfam
Location: 7917 - 9317 (+)
Type: pfam
Location: 7917 - 9317 (+)
Gene ID: MGYG000003479_41_7
Type: CAZyme
Location: 9588 - 11759 (+)
Type: CAZyme
Location: 9588 - 11759 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp900548275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.