Cluster: MGYG000003469_CGC6
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003469
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003469_21 | MGYG000003469_21_14 | 16911 | 18602 | - | 9.B.174.1.1 |
| pfam | MGYG000003469_21 | MGYG000003469_21_15 | 18682 | 19767 | - | DUF3078 |
| pfam | MGYG000003469_21 | MGYG000003469_21_16 | 19899 | 20744 | + | AP_endonuc_2 |
| CAZyme | MGYG000003469_21 | MGYG000003469_21_17 | 20756 | 21724 | + | GH53 |
| TC | MGYG000003469_21 | MGYG000003469_21_18 | 21730 | 22287 | + | 2.A.107.1.2 |
| pfam | MGYG000003469_21 | MGYG000003469_21_19 | 22509 | 22802 | - | P-II |
| TC | MGYG000003469_21 | MGYG000003469_21_20 | 22857 | 26030 | - | 2.A.6.3.6 |
| TC | MGYG000003469_21 | MGYG000003469_21_21 | 26084 | 27106 | - | 2.A.6.2.20 |
| pfam | MGYG000003469_21 | MGYG000003469_21_22 | 27154 | 28518 | - | OEP | OEP |
| STP | MGYG000003469_21 | MGYG000003469_21_23 | 28550 | 29167 | - | TetR_N |
| CAZyme | MGYG000003469_21 | MGYG000003469_21_24 | 29354 | 31387 | - | GH13_8 |
| TC | MGYG000003469_21 | MGYG000003469_21_25 | 31505 | 33430 | + | 2.A.17.1.7 |
| NULL(UNKNOWN) | MGYG000003469_21 | MGYG000003469_21_26 | 33607 | 35997 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003469_21 | MGYG000003469_21_27 | 36246 | 37841 | - | GH20 |
Gene ID: MGYG000003469_21_14
Type: TC
Location: 16911 - 18602 (-)
Type: TC
Location: 16911 - 18602 (-)
Gene ID: MGYG000003469_21_15
Type: pfam
Location: 18682 - 19767 (-)
Type: pfam
Location: 18682 - 19767 (-)
Gene ID: MGYG000003469_21_16
Type: pfam
Location: 19899 - 20744 (+)
Type: pfam
Location: 19899 - 20744 (+)
Gene ID: MGYG000003469_21_17
Type: CAZyme
Location: 20756 - 21724 (+)
Type: CAZyme
Location: 20756 - 21724 (+)
Gene ID: MGYG000003469_21_18
Type: TC
Location: 21730 - 22287 (+)
Type: TC
Location: 21730 - 22287 (+)
Gene ID: MGYG000003469_21_19
Type: pfam
Location: 22509 - 22802 (-)
Type: pfam
Location: 22509 - 22802 (-)
Gene ID: MGYG000003469_21_20
Type: TC
Location: 22857 - 26030 (-)
Type: TC
Location: 22857 - 26030 (-)
Gene ID: MGYG000003469_21_21
Type: TC
Location: 26084 - 27106 (-)
Type: TC
Location: 26084 - 27106 (-)
Gene ID: MGYG000003469_21_22
Type: pfam
Location: 27154 - 28518 (-)
Type: pfam
Location: 27154 - 28518 (-)
Gene ID: MGYG000003469_21_23
Type: STP
Location: 28550 - 29167 (-)
Type: STP
Location: 28550 - 29167 (-)
Gene ID: MGYG000003469_21_24
Type: CAZyme
Location: 29354 - 31387 (-)
Type: CAZyme
Location: 29354 - 31387 (-)
Gene ID: MGYG000003469_21_25
Type: TC
Location: 31505 - 33430 (+)
Type: TC
Location: 31505 - 33430 (+)
Gene ID: MGYG000003469_21_26
Type:
Location: 33607 - 35997 (+)
Type:
Location: 33607 - 35997 (+)
Gene ID: MGYG000003469_21_27
Type: CAZyme
Location: 36246 - 37841 (-)
Type: CAZyme
Location: 36246 - 37841 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp900768015
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.