Cluster: MGYG000003469_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003469
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003469_48 | MGYG000003469_48_1 | 198 | 2324 | - | 8.A.51.1.1 |
| NULL(UNKNOWN) | MGYG000003469_48 | MGYG000003469_48_2 | 2486 | 3166 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003469_48 | MGYG000003469_48_3 | 3187 | 4314 | - | GH73 |
| pfam | MGYG000003469_48 | MGYG000003469_48_4 | 4594 | 5538 | - | Epimerase | RmlD_sub_bind | GDP_Man_Dehyd |
| NULL(UNKNOWN) | MGYG000003469_48 | MGYG000003469_48_5 | 5751 | 6212 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003469_48 | MGYG000003469_48_6 | 6264 | 8117 | - | 2.A.81.1.2 |
Gene ID: MGYG000003469_48_1
Type: TC
Location: 198 - 2324 (-)
Type: TC
Location: 198 - 2324 (-)
Gene ID: MGYG000003469_48_2
Type:
Location: 2486 - 3166 (-)
Type:
Location: 2486 - 3166 (-)
Gene ID: MGYG000003469_48_3
Type: CAZyme
Location: 3187 - 4314 (-)
Type: CAZyme
Location: 3187 - 4314 (-)
Gene ID: MGYG000003469_48_4
Type: pfam
Location: 4594 - 5538 (-)
Type: pfam
Location: 4594 - 5538 (-)
Gene ID: MGYG000003469_48_5
Type:
Location: 5751 - 6212 (+)
Type:
Location: 5751 - 6212 (+)
Gene ID: MGYG000003469_48_6
Type: TC
Location: 6264 - 8117 (-)
Type: TC
Location: 6264 - 8117 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp900768015
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.