Cluster: MGYG000003466_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003466
- CGC Family ID: CGCFAM_01618
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003466_17 | MGYG000003466_17_35 | 37659 | 39437 | - | GH13_36 |
| TC | MGYG000003466_17 | MGYG000003466_17_36 | 39526 | 40629 | - | 3.A.1.1.6 |
| TC | MGYG000003466_17 | MGYG000003466_17_37 | 40629 | 42539 | - | 3.A.1.1.6 |
| TC | MGYG000003466_17 | MGYG000003466_17_38 | 42639 | 43808 | - | 3.A.1.1.26 |
| CAZyme | MGYG000003466_17 | MGYG000003466_17_39 | 43853 | 46588 | - | GH13_14 |
Gene ID: MGYG000003466_17_35
Type: CAZyme
Location: 37659 - 39437 (-)
Type: CAZyme
Location: 37659 - 39437 (-)
Gene ID: MGYG000003466_17_36
Type: TC
Location: 39526 - 40629 (-)
Type: TC
Location: 39526 - 40629 (-)
Gene ID: MGYG000003466_17_37
Type: TC
Location: 40629 - 42539 (-)
Type: TC
Location: 40629 - 42539 (-)
Gene ID: MGYG000003466_17_38
Type: TC
Location: 42639 - 43808 (-)
Type: TC
Location: 42639 - 43808 (-)
Gene ID: MGYG000003466_17_39
Type: CAZyme
Location: 43853 - 46588 (-)
Type: CAZyme
Location: 43853 - 46588 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900767955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.