Cluster: MGYG000003466_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003466
- CGC Family ID: CGCFAM_01350
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003466_50 | MGYG000003466_50_46 | 47903 | 48601 | + | 1.A.14.2.2 |
| peptidase | MGYG000003466_50 | MGYG000003466_50_47 | 48807 | 54632 | + | I39.UPW |
| CAZyme | MGYG000003466_50 | MGYG000003466_50_48 | 54613 | 56913 | + | GT51 |
| pfam | MGYG000003466_50 | MGYG000003466_50_49 | 57048 | 58727 | + | Caps_assemb_Wzi |
| TC | MGYG000003466_50 | MGYG000003466_50_50 | 58730 | 60175 | + | 2.A.66.2.16 |
| CAZyme | MGYG000003466_50 | MGYG000003466_50_51 | 60181 | 61122 | + | GT2 |
| CAZyme | MGYG000003466_50 | MGYG000003466_50_52 | 61132 | 62037 | + | GT2 |
Gene ID: MGYG000003466_50_46
Type: TC
Location: 47903 - 48601 (+)
Type: TC
Location: 47903 - 48601 (+)
Gene ID: MGYG000003466_50_47
Type: peptidase
Location: 48807 - 54632 (+)
Type: peptidase
Location: 48807 - 54632 (+)
Gene ID: MGYG000003466_50_48
Type: CAZyme
Location: 54613 - 56913 (+)
Type: CAZyme
Location: 54613 - 56913 (+)
Gene ID: MGYG000003466_50_49
Type: pfam
Location: 57048 - 58727 (+)
Type: pfam
Location: 57048 - 58727 (+)
Gene ID: MGYG000003466_50_50
Type: TC
Location: 58730 - 60175 (+)
Type: TC
Location: 58730 - 60175 (+)
Gene ID: MGYG000003466_50_51
Type: CAZyme
Location: 60181 - 61122 (+)
Type: CAZyme
Location: 60181 - 61122 (+)
Gene ID: MGYG000003466_50_52
Type: CAZyme
Location: 61132 - 62037 (+)
Type: CAZyme
Location: 61132 - 62037 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900767955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.