Cluster: MGYG000003466_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003466
- CGC Family ID: CGCFAM_04113
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003466_46 | MGYG000003466_46_46 | 50634 | 51215 | - | 2.A.51.1.6 |
| TC | MGYG000003466_46 | MGYG000003466_46_47 | 51212 | 51793 | - | 2.A.51.1.6 |
| CAZyme | MGYG000003466_46 | MGYG000003466_46_48 | 51842 | 53878 | - | GH31_1 |
| TC | MGYG000003466_46 | MGYG000003466_46_49 | 53884 | 54723 | - | 3.A.1.1.45 |
| TC | MGYG000003466_46 | MGYG000003466_46_50 | 54720 | 56291 | - | 3.A.1.1.45 |
| TC | MGYG000003466_46 | MGYG000003466_46_51 | 56363 | 57640 | - | 3.A.1.1.44 |
Gene ID: MGYG000003466_46_46
Type: TC
Location: 50634 - 51215 (-)
Type: TC
Location: 50634 - 51215 (-)
Gene ID: MGYG000003466_46_47
Type: TC
Location: 51212 - 51793 (-)
Type: TC
Location: 51212 - 51793 (-)
Gene ID: MGYG000003466_46_48
Type: CAZyme
Location: 51842 - 53878 (-)
Type: CAZyme
Location: 51842 - 53878 (-)
Gene ID: MGYG000003466_46_49
Type: TC
Location: 53884 - 54723 (-)
Type: TC
Location: 53884 - 54723 (-)
Gene ID: MGYG000003466_46_50
Type: TC
Location: 54720 - 56291 (-)
Type: TC
Location: 54720 - 56291 (-)
Gene ID: MGYG000003466_46_51
Type: TC
Location: 56363 - 57640 (-)
Type: TC
Location: 56363 - 57640 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900767955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.