Cluster: MGYG000003466_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003466
- CGC Family ID: CGCFAM_00700
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003466_42 | MGYG000003466_42_27 | 29792 | 31036 | + | 9.B.10.1.1 |
| TC | MGYG000003466_42 | MGYG000003466_42_28 | 31042 | 32415 | + | 2.A.66.1.13 |
| pfam | MGYG000003466_42 | MGYG000003466_42_29 | 32565 | 34820 | + | Gly_radical | PFL-like |
| pfam | MGYG000003466_42 | MGYG000003466_42_30 | 34963 | 35724 | + | Radical_SAM | Fer4_12 |
| CAZyme | MGYG000003466_42 | MGYG000003466_42_31 | 35733 | 36326 | - | GH73 |
Gene ID: MGYG000003466_42_27
Type: TC
Location: 29792 - 31036 (+)
Type: TC
Location: 29792 - 31036 (+)
Gene ID: MGYG000003466_42_28
Type: TC
Location: 31042 - 32415 (+)
Type: TC
Location: 31042 - 32415 (+)
Gene ID: MGYG000003466_42_29
Type: pfam
Location: 32565 - 34820 (+)
Type: pfam
Location: 32565 - 34820 (+)
Gene ID: MGYG000003466_42_30
Type: pfam
Location: 34963 - 35724 (+)
Type: pfam
Location: 34963 - 35724 (+)
Gene ID: MGYG000003466_42_31
Type: CAZyme
Location: 35733 - 36326 (-)
Type: CAZyme
Location: 35733 - 36326 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900767955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.