Cluster: MGYG000003466_CGC12
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003466
- CGC Family ID: CGCFAM_04095
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003466_37 | MGYG000003466_37_149 | 188278 | 189993 | + | CBM34 | GH13_20 |
| TC | MGYG000003466_37 | MGYG000003466_37_150 | 190007 | 191323 | - | 8.A.59.4.1 |
| TC | MGYG000003466_37 | MGYG000003466_37_151 | 191431 | 192978 | + | 9.B.174.1.1 |
| pfam | MGYG000003466_37 | MGYG000003466_37_152 | 192978 | 193802 | + | Methyltrans_RNA |
| CAZyme | MGYG000003466_37 | MGYG000003466_37_153 | 193784 | 194524 | + | GT26 |
| pfam | MGYG000003466_37 | MGYG000003466_37_154 | 194528 | 195262 | - | SpoU_methylase |
| STP | MGYG000003466_37 | MGYG000003466_37_155 | 195400 | 195951 | + | STAS |
| TC | MGYG000003466_37 | MGYG000003466_37_156 | 196389 | 198509 | + | 3.A.1.30.1 |
Gene ID: MGYG000003466_37_149
Type: CAZyme
Location: 188278 - 189993 (+)
Type: CAZyme
Location: 188278 - 189993 (+)
Gene ID: MGYG000003466_37_150
Type: TC
Location: 190007 - 191323 (-)
Type: TC
Location: 190007 - 191323 (-)
Gene ID: MGYG000003466_37_151
Type: TC
Location: 191431 - 192978 (+)
Type: TC
Location: 191431 - 192978 (+)
Gene ID: MGYG000003466_37_152
Type: pfam
Location: 192978 - 193802 (+)
Type: pfam
Location: 192978 - 193802 (+)
Gene ID: MGYG000003466_37_153
Type: CAZyme
Location: 193784 - 194524 (+)
Type: CAZyme
Location: 193784 - 194524 (+)
Gene ID: MGYG000003466_37_154
Type: pfam
Location: 194528 - 195262 (-)
Type: pfam
Location: 194528 - 195262 (-)
Gene ID: MGYG000003466_37_155
Type: STP
Location: 195400 - 195951 (+)
Type: STP
Location: 195400 - 195951 (+)
Gene ID: MGYG000003466_37_156
Type: TC
Location: 196389 - 198509 (+)
Type: TC
Location: 196389 - 198509 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900767955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.