Cluster: MGYG000003466_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003466
- CGC Family ID: CGCFAM_04575
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003466_31 | MGYG000003466_31_48 | 58817 | 59713 | + | GH23 |
| pfam | MGYG000003466_31 | MGYG000003466_31_49 | 59770 | 61095 | + | OmpA |
| pfam | MGYG000003466_31 | MGYG000003466_31_50 | 61118 | 61753 | + | LUD_dom |
| TC | MGYG000003466_31 | MGYG000003466_31_51 | 61885 | 63006 | - | 3.A.1.1.22 |
Gene ID: MGYG000003466_31_48
Type: CAZyme
Location: 58817 - 59713 (+)
Type: CAZyme
Location: 58817 - 59713 (+)
Gene ID: MGYG000003466_31_49
Type: pfam
Location: 59770 - 61095 (+)
Type: pfam
Location: 59770 - 61095 (+)
Gene ID: MGYG000003466_31_50
Type: pfam
Location: 61118 - 61753 (+)
Type: pfam
Location: 61118 - 61753 (+)
Gene ID: MGYG000003466_31_51
Type: TC
Location: 61885 - 63006 (-)
Type: TC
Location: 61885 - 63006 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900767955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.