Cluster: MGYG000003463_CGC21
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003463
- CGC Family ID: CGCFAM_04028
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003463_114 | MGYG000003463_114_2 | 285 | 788 | + | 3.A.1.24.5 |
| pfam | MGYG000003463_114 | MGYG000003463_114_3 | 1458 | 1817 | + | AAA-ATPase_like |
| CAZyme | MGYG000003463_114 | MGYG000003463_114_4 | 1978 | 2688 | - | GT25 |
| TC | MGYG000003463_114 | MGYG000003463_114_5 | 3014 | 5194 | + | 4.A.3.2.5 |
| NULL(UNKNOWN) | MGYG000003463_114 | MGYG000003463_114_6 | 5332 | 6057 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | MGYG000003463_114 | MGYG000003463_114_7 | 6087 | 7595 | + | EAL | GGDEF |
| TC | MGYG000003463_114 | MGYG000003463_114_8 | 7705 | 8286 | + | 2.A.107.1.2 |
Gene ID: MGYG000003463_114_2
Type: TC
Location: 285 - 788 (+)
Type: TC
Location: 285 - 788 (+)
Gene ID: MGYG000003463_114_3
Type: pfam
Location: 1458 - 1817 (+)
Type: pfam
Location: 1458 - 1817 (+)
Gene ID: MGYG000003463_114_4
Type: CAZyme
Location: 1978 - 2688 (-)
Type: CAZyme
Location: 1978 - 2688 (-)
Gene ID: MGYG000003463_114_5
Type: TC
Location: 3014 - 5194 (+)
Type: TC
Location: 3014 - 5194 (+)
Gene ID: MGYG000003463_114_6
Type:
Location: 5332 - 6057 (+)
Type:
Location: 5332 - 6057 (+)
Gene ID: MGYG000003463_114_7
Type: STP
Location: 6087 - 7595 (+)
Type: STP
Location: 6087 - 7595 (+)
Gene ID: MGYG000003463_114_8
Type: TC
Location: 7705 - 8286 (+)
Type: TC
Location: 7705 - 8286 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Succinivibrionaceae
Genus
Succinivibrio
Species
Succinivibrio sp900767695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.