Cluster: MGYG000003462_CGC14
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003462
- CGC Family ID: CGCFAM_00290
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003462_43 | MGYG000003462_43_28 | 27931 | 29331 | + | GH1 |
| TC | MGYG000003462_43 | MGYG000003462_43_29 | 29452 | 30804 | + | 4.A.3.2.2 |
| TC | MGYG000003462_43 | MGYG000003462_43_30 | 30958 | 31260 | + | 4.A.3.2.9 |
| TC | MGYG000003462_43 | MGYG000003462_43_31 | 31270 | 31602 | + | 4.A.3.2.3 |
| pfam | MGYG000003462_43 | MGYG000003462_43_32 | 31738 | 32409 | + | Lipase_GDSL | Lipase_GDSL_2 |
| TC | MGYG000003462_43 | MGYG000003462_43_33 | 32419 | 32727 | + | 4.A.3.2.3 |
| STP | MGYG000003462_43 | MGYG000003462_43_34 | 32913 | 33866 | + | Glucokinase |
| pfam | MGYG000003462_43 | MGYG000003462_43_35 | 34042 | 34965 | + | DHH | DHHA2 |
| TC | MGYG000003462_43 | MGYG000003462_43_36 | 35233 | 36591 | + | 2.A.33.1.1 |
Gene ID: MGYG000003462_43_28
Type: CAZyme
Location: 27931 - 29331 (+)
Type: CAZyme
Location: 27931 - 29331 (+)
Gene ID: MGYG000003462_43_29
Type: TC
Location: 29452 - 30804 (+)
Type: TC
Location: 29452 - 30804 (+)
Gene ID: MGYG000003462_43_30
Type: TC
Location: 30958 - 31260 (+)
Type: TC
Location: 30958 - 31260 (+)
Gene ID: MGYG000003462_43_31
Type: TC
Location: 31270 - 31602 (+)
Type: TC
Location: 31270 - 31602 (+)
Gene ID: MGYG000003462_43_32
Type: pfam
Location: 31738 - 32409 (+)
Type: pfam
Location: 31738 - 32409 (+)
Gene ID: MGYG000003462_43_33
Type: TC
Location: 32419 - 32727 (+)
Type: TC
Location: 32419 - 32727 (+)
Gene ID: MGYG000003462_43_34
Type: STP
Location: 32913 - 33866 (+)
Type: STP
Location: 32913 - 33866 (+)
Gene ID: MGYG000003462_43_35
Type: pfam
Location: 34042 - 34965 (+)
Type: pfam
Location: 34042 - 34965 (+)
Gene ID: MGYG000003462_43_36
Type: TC
Location: 35233 - 36591 (+)
Type: TC
Location: 35233 - 36591 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900767675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.