Cluster: MGYG000003452_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003452
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003452_18 | MGYG000003452_18_7 | 4649 | 6094 | - | 2.A.1.3.30 |
| CAZyme | MGYG000003452_18 | MGYG000003452_18_8 | 6705 | 9038 | + | GH3 |
| STP | MGYG000003452_18 | MGYG000003452_18_9 | 9178 | 9813 | - | TetR_N |
| CAZyme | MGYG000003452_18 | MGYG000003452_18_10 | 9824 | 11062 | - | GH5_44 |
Gene ID: MGYG000003452_18_7
Type: TC
Location: 4649 - 6094 (-)
Type: TC
Location: 4649 - 6094 (-)
Gene ID: MGYG000003452_18_8
Type: CAZyme
Location: 6705 - 9038 (+)
Type: CAZyme
Location: 6705 - 9038 (+)
Gene ID: MGYG000003452_18_9
Type: STP
Location: 9178 - 9813 (-)
Type: STP
Location: 9178 - 9813 (-)
Gene ID: MGYG000003452_18_10
Type: CAZyme
Location: 9824 - 11062 (-)
Type: CAZyme
Location: 9824 - 11062 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium ruminantium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003452_18_7 | vegetarian > vegan | 1.40995 | 0.00363 |