Cluster: MGYG000003442_CGC5
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003442
- CGC Family ID: CGCFAM_02519
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003442_78 | MGYG000003442_78_2 | 147 | 1706 | - | GH28 |
| NULL(UNKNOWN) | MGYG000003442_78 | MGYG000003442_78_3 | 1708 | 2124 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003442_78 | MGYG000003442_78_4 | 2147 | 3520 | - | 3.A.1.1.11 |
| TF | MGYG000003442_78 | MGYG000003442_78_5 | 3780 | 4499 | + | GntR |
| pfam | MGYG000003442_78 | MGYG000003442_78_6 | 4764 | 5708 | - | GARS_A | Dala_Dala_lig_N | ATP-grasp | ATP-grasp_3 | CPSase_L_D2 | Dala_Dala_lig_C | RimK |
| TC | MGYG000003442_78 | MGYG000003442_78_7 | 6042 | 7313 | + | 3.A.11.1.4 |
| STP | MGYG000003442_78 | MGYG000003442_78_8 | 7656 | 9458 | + | CHASE | GGDEF |
| TC | MGYG000003442_78 | MGYG000003442_78_9 | 9684 | 10814 | + | 3.B.1.1.5 |
| NULL(UNKNOWN) | MGYG000003442_78 | MGYG000003442_78_10 | 10937 | 11065 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000003442_78 | MGYG000003442_78_11 | 11210 | 11809 | - | Cytidylate_kin2 |
| TC | MGYG000003442_78 | MGYG000003442_78_12 | 12015 | 12761 | - | 3.A.1.3.25 |
| TC | MGYG000003442_78 | MGYG000003442_78_13 | 12785 | 13465 | - | 3.A.1.3.25 |
| TC | MGYG000003442_78 | MGYG000003442_78_14 | 13712 | 14569 | - | 3.A.1.3.25 |
Gene ID: MGYG000003442_78_2
Type: CAZyme
Location: 147 - 1706 (-)
Type: CAZyme
Location: 147 - 1706 (-)
Gene ID: MGYG000003442_78_3
Type:
Location: 1708 - 2124 (-)
Type:
Location: 1708 - 2124 (-)
Gene ID: MGYG000003442_78_4
Type: TC
Location: 2147 - 3520 (-)
Type: TC
Location: 2147 - 3520 (-)
Gene ID: MGYG000003442_78_5
Type: TF
Location: 3780 - 4499 (+)
Type: TF
Location: 3780 - 4499 (+)
Gene ID: MGYG000003442_78_6
Type: pfam
Location: 4764 - 5708 (-)
Type: pfam
Location: 4764 - 5708 (-)
Gene ID: MGYG000003442_78_7
Type: TC
Location: 6042 - 7313 (+)
Type: TC
Location: 6042 - 7313 (+)
Gene ID: MGYG000003442_78_8
Type: STP
Location: 7656 - 9458 (+)
Type: STP
Location: 7656 - 9458 (+)
Gene ID: MGYG000003442_78_9
Type: TC
Location: 9684 - 10814 (+)
Type: TC
Location: 9684 - 10814 (+)
Gene ID: MGYG000003442_78_10
Type:
Location: 10937 - 11065 (+)
Type:
Location: 10937 - 11065 (+)
Gene ID: MGYG000003442_78_11
Type: pfam
Location: 11210 - 11809 (-)
Type: pfam
Location: 11210 - 11809 (-)
Gene ID: MGYG000003442_78_12
Type: TC
Location: 12015 - 12761 (-)
Type: TC
Location: 12015 - 12761 (-)
Gene ID: MGYG000003442_78_13
Type: TC
Location: 12785 - 13465 (-)
Type: TC
Location: 12785 - 13465 (-)
Gene ID: MGYG000003442_78_14
Type: TC
Location: 13712 - 14569 (-)
Type: TC
Location: 13712 - 14569 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oribacterium
Species
Oribacterium sp902485915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.