Cluster: MGYG000003437_CGC17
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 9
- Substrate:
- Genome ID: MGYG000003437
- CGC Family ID: CGCFAM_10952
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003437_53 | MGYG000003437_53_18 | 21676 | 23772 | - | GH3 |
| TF | MGYG000003437_53 | MGYG000003437_53_19 | 23890 | 24903 | + | LacI |
| NULL(UNKNOWN) | MGYG000003437_53 | MGYG000003437_53_20 | 24916 | 27207 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003437_53 | MGYG000003437_53_21 | 27213 | 28988 | + | GH35 |
| pfam | MGYG000003437_53 | MGYG000003437_53_22 | 29009 | 30691 | + | MFS_1 | MFS_2 |
| pfam | MGYG000003437_53 | MGYG000003437_53_23 | 30721 | 31569 | + | LRR_5 | LRR_5 |
| CAZyme | MGYG000003437_53 | MGYG000003437_53_24 | 31575 | 33128 | + | GH39 |
| CAZyme | MGYG000003437_53 | MGYG000003437_53_25 | 33138 | 36098 | + | GH2 |
| CAZyme | MGYG000003437_53 | MGYG000003437_53_26 | 36131 | 38209 | - | GH95 |
| NULL(UNKNOWN) | MGYG000003437_53 | MGYG000003437_53_27 | 38353 | 40506 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003437_53 | MGYG000003437_53_28 | 40506 | 41744 | + | GH109 |
| CAZyme | MGYG000003437_53 | MGYG000003437_53_29 | 41756 | 43885 | + | GH141 |
| CAZyme | MGYG000003437_53 | MGYG000003437_53_30 | 43904 | 45256 | + | GH29 |
| CAZyme | MGYG000003437_53 | MGYG000003437_53_31 | 45318 | 46766 | + | GH43_35 |
| pfam | MGYG000003437_53 | MGYG000003437_53_32 | 46906 | 47901 | + | ROK |
| TC | MGYG000003437_53 | MGYG000003437_53_33 | 47907 | 49466 | + | 2.A.2.3.6 |
Gene ID: MGYG000003437_53_18
Type: CAZyme
Location: 21676 - 23772 (-)
Type: CAZyme
Location: 21676 - 23772 (-)
Gene ID: MGYG000003437_53_19
Type: TF
Location: 23890 - 24903 (+)
Type: TF
Location: 23890 - 24903 (+)
Gene ID: MGYG000003437_53_20
Type:
Location: 24916 - 27207 (+)
Type:
Location: 24916 - 27207 (+)
Gene ID: MGYG000003437_53_21
Type: CAZyme
Location: 27213 - 28988 (+)
Type: CAZyme
Location: 27213 - 28988 (+)
Gene ID: MGYG000003437_53_22
Type: pfam
Location: 29009 - 30691 (+)
Type: pfam
Location: 29009 - 30691 (+)
Gene ID: MGYG000003437_53_23
Type: pfam
Location: 30721 - 31569 (+)
Type: pfam
Location: 30721 - 31569 (+)
Gene ID: MGYG000003437_53_24
Type: CAZyme
Location: 31575 - 33128 (+)
Type: CAZyme
Location: 31575 - 33128 (+)
Gene ID: MGYG000003437_53_25
Type: CAZyme
Location: 33138 - 36098 (+)
Type: CAZyme
Location: 33138 - 36098 (+)
Gene ID: MGYG000003437_53_26
Type: CAZyme
Location: 36131 - 38209 (-)
Type: CAZyme
Location: 36131 - 38209 (-)
Gene ID: MGYG000003437_53_27
Type:
Location: 38353 - 40506 (+)
Type:
Location: 38353 - 40506 (+)
Gene ID: MGYG000003437_53_28
Type: CAZyme
Location: 40506 - 41744 (+)
Type: CAZyme
Location: 40506 - 41744 (+)
Gene ID: MGYG000003437_53_29
Type: CAZyme
Location: 41756 - 43885 (+)
Type: CAZyme
Location: 41756 - 43885 (+)
Gene ID: MGYG000003437_53_30
Type: CAZyme
Location: 43904 - 45256 (+)
Type: CAZyme
Location: 43904 - 45256 (+)
Gene ID: MGYG000003437_53_31
Type: CAZyme
Location: 45318 - 46766 (+)
Type: CAZyme
Location: 45318 - 46766 (+)
Gene ID: MGYG000003437_53_32
Type: pfam
Location: 46906 - 47901 (+)
Type: pfam
Location: 46906 - 47901 (+)
Gene ID: MGYG000003437_53_33
Type: TC
Location: 47907 - 49466 (+)
Type: TC
Location: 47907 - 49466 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp900767025
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.