Cluster: MGYG000003403_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003403
- CGC Family ID: CGCFAM_01427
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003403_4 | MGYG000003403_4_51 | 59211 | 60356 | - | GH103 |
| TC | MGYG000003403_4 | MGYG000003403_4_52 | 61348 | 62559 | - | 2.A.103.1.2 |
| TC | MGYG000003403_4 | MGYG000003403_4_53 | 62592 | 63704 | - | 2.A.103.1.2 |
| peptidase | MGYG000003403_4 | MGYG000003403_4_54 | 63701 | 65773 | - | X52.001 |
| pfam | MGYG000003403_4 | MGYG000003403_4_55 | 65777 | 66262 | - | MreD |
| TC | MGYG000003403_4 | MGYG000003403_4_56 | 66259 | 67341 | - | 9.B.157.1.3 |
| TC | MGYG000003403_4 | MGYG000003403_4_57 | 67463 | 68509 | - | 9.B.157.1.3 |
Gene ID: MGYG000003403_4_51
Type: CAZyme
Location: 59211 - 60356 (-)
Type: CAZyme
Location: 59211 - 60356 (-)
Gene ID: MGYG000003403_4_52
Type: TC
Location: 61348 - 62559 (-)
Type: TC
Location: 61348 - 62559 (-)
Gene ID: MGYG000003403_4_53
Type: TC
Location: 62592 - 63704 (-)
Type: TC
Location: 62592 - 63704 (-)
Gene ID: MGYG000003403_4_54
Type: peptidase
Location: 63701 - 65773 (-)
Type: peptidase
Location: 63701 - 65773 (-)
Gene ID: MGYG000003403_4_55
Type: pfam
Location: 65777 - 66262 (-)
Type: pfam
Location: 65777 - 66262 (-)
Gene ID: MGYG000003403_4_56
Type: TC
Location: 66259 - 67341 (-)
Type: TC
Location: 66259 - 67341 (-)
Gene ID: MGYG000003403_4_57
Type: TC
Location: 67463 - 68509 (-)
Type: TC
Location: 67463 - 68509 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_AM
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.