Cluster: MGYG000003403_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003403
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003403_3 | MGYG000003403_3_113 | 122525 | 124240 | - | GH13_2 |
| TC | MGYG000003403_3 | MGYG000003403_3_114 | 124240 | 125727 | - | 2.A.2.6.3 |
| NULL(UNKNOWN) | MGYG000003403_3 | MGYG000003403_3_115 | 125724 | 127916 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003403_3 | MGYG000003403_3_116 | 128160 | 130205 | + | GH97 |
| TC | MGYG000003403_3 | MGYG000003403_3_117 | 130457 | 133225 | + | 1.B.14.12.1 |
| CAZyme | MGYG000003403_3 | MGYG000003403_3_118 | 133409 | 135022 | - | GH13_23 |
Gene ID: MGYG000003403_3_113
Type: CAZyme
Location: 122525 - 124240 (-)
Type: CAZyme
Location: 122525 - 124240 (-)
Gene ID: MGYG000003403_3_114
Type: TC
Location: 124240 - 125727 (-)
Type: TC
Location: 124240 - 125727 (-)
Gene ID: MGYG000003403_3_115
Type:
Location: 125724 - 127916 (-)
Type:
Location: 125724 - 127916 (-)
Gene ID: MGYG000003403_3_116
Type: CAZyme
Location: 128160 - 130205 (+)
Type: CAZyme
Location: 128160 - 130205 (+)
Gene ID: MGYG000003403_3_117
Type: TC
Location: 130457 - 133225 (+)
Type: TC
Location: 130457 - 133225 (+)
Gene ID: MGYG000003403_3_118
Type: CAZyme
Location: 133409 - 135022 (-)
Type: CAZyme
Location: 133409 - 135022 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_AM
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.