Cluster: MGYG000003403_CGC45
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003403
- CGC Family ID: CGCFAM_10449
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003403_31 | MGYG000003403_31_36 | 43357 | 44787 | + | 1.A.11.1.1 |
| pfam | MGYG000003403_31 | MGYG000003403_31_37 | 45030 | 45776 | + | Amidase_2 |
| pfam | MGYG000003403_31 | MGYG000003403_31_38 | 45895 | 46434 | + | Ni_hydr_CYTB |
| CAZyme | MGYG000003403_31 | MGYG000003403_31_39 | 46486 | 47649 | + | GH102 |
Gene ID: MGYG000003403_31_36
Type: TC
Location: 43357 - 44787 (+)
Type: TC
Location: 43357 - 44787 (+)
Gene ID: MGYG000003403_31_37
Type: pfam
Location: 45030 - 45776 (+)
Type: pfam
Location: 45030 - 45776 (+)
Gene ID: MGYG000003403_31_38
Type: pfam
Location: 45895 - 46434 (+)
Type: pfam
Location: 45895 - 46434 (+)
Gene ID: MGYG000003403_31_39
Type: CAZyme
Location: 46486 - 47649 (+)
Type: CAZyme
Location: 46486 - 47649 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_AM
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.