Cluster: MGYG000003403_CGC43
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003403
- CGC Family ID: CGCFAM_02817
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003403_27 | MGYG000003403_27_327 | 343934 | 346465 | + | 1.B.52.2.1 |
| TC | MGYG000003403_27 | MGYG000003403_27_328 | 346544 | 346930 | - | 1.E.55.2.3 |
| NULL(UNKNOWN) | MGYG000003403_27 | MGYG000003403_27_329 | 347144 | 347314 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003403_27 | MGYG000003403_27_330 | 347375 | 349420 | - | 1.B.14.1.4 |
| CAZyme | MGYG000003403_27 | MGYG000003403_27_331 | 349911 | 351836 | + | GT2 |
| peptidase | MGYG000003403_27 | MGYG000003403_27_332 | 351887 | 352546 | + | S09.UPW |
| TC | MGYG000003403_27 | MGYG000003403_27_333 | 352550 | 353593 | + | 8.A.59.2.1 |
Gene ID: MGYG000003403_27_327
Type: TC
Location: 343934 - 346465 (+)
Type: TC
Location: 343934 - 346465 (+)
Gene ID: MGYG000003403_27_328
Type: TC
Location: 346544 - 346930 (-)
Type: TC
Location: 346544 - 346930 (-)
Gene ID: MGYG000003403_27_329
Type:
Location: 347144 - 347314 (+)
Type:
Location: 347144 - 347314 (+)
Gene ID: MGYG000003403_27_330
Type: TC
Location: 347375 - 349420 (-)
Type: TC
Location: 347375 - 349420 (-)
Gene ID: MGYG000003403_27_331
Type: CAZyme
Location: 349911 - 351836 (+)
Type: CAZyme
Location: 349911 - 351836 (+)
Gene ID: MGYG000003403_27_332
Type: peptidase
Location: 351887 - 352546 (+)
Type: peptidase
Location: 351887 - 352546 (+)
Gene ID: MGYG000003403_27_333
Type: TC
Location: 352550 - 353593 (+)
Type: TC
Location: 352550 - 353593 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_AM
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.