Cluster: MGYG000003403_CGC42
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003403
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003403_27 | MGYG000003403_27_286 | 300379 | 302871 | - | 3.A.7.7.1 |
| TC | MGYG000003403_27 | MGYG000003403_27_287 | 303062 | 303994 | - | 1.E.43.3.1 |
| pfam | MGYG000003403_27 | MGYG000003403_27_288 | 304044 | 304796 | - | Pilin | GYF_2 |
| pfam | MGYG000003403_27 | MGYG000003403_27_289 | 304836 | 305309 | - | DUF494 |
| TC | MGYG000003403_27 | MGYG000003403_27_290 | 305560 | 306480 | - | 3.A.11.1.3 |
| CAZyme | MGYG000003403_27 | MGYG000003403_27_291 | 306612 | 307709 | - | CBM50 |
Gene ID: MGYG000003403_27_286
Type: TC
Location: 300379 - 302871 (-)
Type: TC
Location: 300379 - 302871 (-)
Gene ID: MGYG000003403_27_287
Type: TC
Location: 303062 - 303994 (-)
Type: TC
Location: 303062 - 303994 (-)
Gene ID: MGYG000003403_27_288
Type: pfam
Location: 304044 - 304796 (-)
Type: pfam
Location: 304044 - 304796 (-)
Gene ID: MGYG000003403_27_289
Type: pfam
Location: 304836 - 305309 (-)
Type: pfam
Location: 304836 - 305309 (-)
Gene ID: MGYG000003403_27_290
Type: TC
Location: 305560 - 306480 (-)
Type: TC
Location: 305560 - 306480 (-)
Gene ID: MGYG000003403_27_291
Type: CAZyme
Location: 306612 - 307709 (-)
Type: CAZyme
Location: 306612 - 307709 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_AM
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.