Cluster: MGYG000003403_CGC39
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003403
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003403_25 | MGYG000003403_25_413 | 455183 | 455776 | - | AA6 |
| TC | MGYG000003403_25 | MGYG000003403_25_414 | 455854 | 457128 | + | 9.B.126.2.1 |
| pfam | MGYG000003403_25 | MGYG000003403_25_415 | 457125 | 457700 | + | Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_8 |
| pfam | MGYG000003403_25 | MGYG000003403_25_416 | 458238 | 459020 | - | PPK2 |
| CAZyme | MGYG000003403_25 | MGYG000003403_25_417 | 459197 | 460909 | - | GT41 |
Gene ID: MGYG000003403_25_413
Type: CAZyme
Location: 455183 - 455776 (-)
Type: CAZyme
Location: 455183 - 455776 (-)
Gene ID: MGYG000003403_25_414
Type: TC
Location: 455854 - 457128 (+)
Type: TC
Location: 455854 - 457128 (+)
Gene ID: MGYG000003403_25_415
Type: pfam
Location: 457125 - 457700 (+)
Type: pfam
Location: 457125 - 457700 (+)
Gene ID: MGYG000003403_25_416
Type: pfam
Location: 458238 - 459020 (-)
Type: pfam
Location: 458238 - 459020 (-)
Gene ID: MGYG000003403_25_417
Type: CAZyme
Location: 459197 - 460909 (-)
Type: CAZyme
Location: 459197 - 460909 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_AM
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.