Cluster: MGYG000003403_CGC38
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003403
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003403_25 | MGYG000003403_25_317 | 355804 | 356715 | + | CE11 |
| pfam | MGYG000003403_25 | MGYG000003403_25_318 | 356998 | 357447 | - | DciA |
| STP | MGYG000003403_25 | MGYG000003403_25_319 | 357460 | 358416 | + | Peptidase_M23 |
| TC | MGYG000003403_25 | MGYG000003403_25_320 | 358640 | 361372 | + | 3.A.5.1.1 |
Gene ID: MGYG000003403_25_317
Type: CAZyme
Location: 355804 - 356715 (+)
Type: CAZyme
Location: 355804 - 356715 (+)
Gene ID: MGYG000003403_25_318
Type: pfam
Location: 356998 - 357447 (-)
Type: pfam
Location: 356998 - 357447 (-)
Gene ID: MGYG000003403_25_319
Type: STP
Location: 357460 - 358416 (+)
Type: STP
Location: 357460 - 358416 (+)
Gene ID: MGYG000003403_25_320
Type: TC
Location: 358640 - 361372 (+)
Type: TC
Location: 358640 - 361372 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_AM
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.