Cluster: MGYG000003403_CGC36
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003403
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003403_25 | MGYG000003403_25_260 | 291765 | 293912 | + | GT2 |
| pfam | MGYG000003403_25 | MGYG000003403_25_261 | 293909 | 296743 | + | NfrA_C |
| pfam | MGYG000003403_25 | MGYG000003403_25_262 | 296737 | 297741 | - | DUF4434 |
| TC | MGYG000003403_25 | MGYG000003403_25_263 | 297845 | 299161 | - | 2.A.40.7.6 |
| TC | MGYG000003403_25 | MGYG000003403_25_264 | 299325 | 300989 | - | 3.A.1.120.6 |
Gene ID: MGYG000003403_25_260
Type: CAZyme
Location: 291765 - 293912 (+)
Type: CAZyme
Location: 291765 - 293912 (+)
Gene ID: MGYG000003403_25_261
Type: pfam
Location: 293909 - 296743 (+)
Type: pfam
Location: 293909 - 296743 (+)
Gene ID: MGYG000003403_25_262
Type: pfam
Location: 296737 - 297741 (-)
Type: pfam
Location: 296737 - 297741 (-)
Gene ID: MGYG000003403_25_263
Type: TC
Location: 297845 - 299161 (-)
Type: TC
Location: 297845 - 299161 (-)
Gene ID: MGYG000003403_25_264
Type: TC
Location: 299325 - 300989 (-)
Type: TC
Location: 299325 - 300989 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_AM
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.