Cluster: MGYG000003403_CGC34
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003403
- CGC Family ID: CGCFAM_02511
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003403_25 | MGYG000003403_25_187 | 199939 | 201294 | + | GT4 |
| TC | MGYG000003403_25 | MGYG000003403_25_188 | 201287 | 202081 | + | 3.A.1.103.6 |
| TC | MGYG000003403_25 | MGYG000003403_25_189 | 202078 | 203319 | + | 3.A.1.103.6 |
| pfam | MGYG000003403_25 | MGYG000003403_25_190 | 203335 | 204738 | + | Methyltransf_21 |
| CAZyme | MGYG000003403_25 | MGYG000003403_25_191 | 204735 | 207251 | + | GT4 | GT4 |
Gene ID: MGYG000003403_25_187
Type: CAZyme
Location: 199939 - 201294 (+)
Type: CAZyme
Location: 199939 - 201294 (+)
Gene ID: MGYG000003403_25_188
Type: TC
Location: 201287 - 202081 (+)
Type: TC
Location: 201287 - 202081 (+)
Gene ID: MGYG000003403_25_189
Type: TC
Location: 202078 - 203319 (+)
Type: TC
Location: 202078 - 203319 (+)
Gene ID: MGYG000003403_25_190
Type: pfam
Location: 203335 - 204738 (+)
Type: pfam
Location: 203335 - 204738 (+)
Gene ID: MGYG000003403_25_191
Type: CAZyme
Location: 204735 - 207251 (+)
Type: CAZyme
Location: 204735 - 207251 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_AM
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.