Cluster: MGYG000003403_CGC30
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003403
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003403_24 | MGYG000003403_24_34 | 43634 | 44356 | + | GT2 |
| TC | MGYG000003403_24 | MGYG000003403_24_35 | 44356 | 44703 | + | 2.A.123.4.3 |
| pfam | MGYG000003403_24 | MGYG000003403_24_36 | 45007 | 46779 | + | DUF885 |
| TC | MGYG000003403_24 | MGYG000003403_24_37 | 46913 | 50122 | - | 2.A.6.1.15 |
| TC | MGYG000003403_24 | MGYG000003403_24_38 | 50133 | 51338 | - | 2.A.6.1.15 |
| TC | MGYG000003403_24 | MGYG000003403_24_39 | 51335 | 52588 | - | 2.A.6.1.12 |
Gene ID: MGYG000003403_24_34
Type: CAZyme
Location: 43634 - 44356 (+)
Type: CAZyme
Location: 43634 - 44356 (+)
Gene ID: MGYG000003403_24_35
Type: TC
Location: 44356 - 44703 (+)
Type: TC
Location: 44356 - 44703 (+)
Gene ID: MGYG000003403_24_36
Type: pfam
Location: 45007 - 46779 (+)
Type: pfam
Location: 45007 - 46779 (+)
Gene ID: MGYG000003403_24_37
Type: TC
Location: 46913 - 50122 (-)
Type: TC
Location: 46913 - 50122 (-)
Gene ID: MGYG000003403_24_38
Type: TC
Location: 50133 - 51338 (-)
Type: TC
Location: 50133 - 51338 (-)
Gene ID: MGYG000003403_24_39
Type: TC
Location: 51335 - 52588 (-)
Type: TC
Location: 51335 - 52588 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_AM
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.