Cluster: MGYG000003403_CGC26
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003403
- CGC Family ID: CGCFAM_01451
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003403_21 | MGYG000003403_21_79 | 97197 | 97835 | + | 1.C.113.1.1 |
| TC | MGYG000003403_21 | MGYG000003403_21_80 | 97919 | 99892 | + | 9.B.121.1.1 |
| STP | MGYG000003403_21 | MGYG000003403_21_81 | 100464 | 100895 | - | CBS | CBS |
| CAZyme | MGYG000003403_21 | MGYG000003403_21_82 | 100855 | 101874 | - | GT2 |
| CAZyme | MGYG000003403_21 | MGYG000003403_21_83 | 101923 | 102672 | - | GT51 |
| pfam | MGYG000003403_21 | MGYG000003403_21_84 | 102750 | 103643 | + | HSP33 |
| NULL(UNKNOWN) | MGYG000003403_21 | MGYG000003403_21_85 | 103760 | 104608 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003403_21 | MGYG000003403_21_86 | 104992 | 107745 | + | 1.B.14.6.11 |
Gene ID: MGYG000003403_21_79
Type: TC
Location: 97197 - 97835 (+)
Type: TC
Location: 97197 - 97835 (+)
Gene ID: MGYG000003403_21_80
Type: TC
Location: 97919 - 99892 (+)
Type: TC
Location: 97919 - 99892 (+)
Gene ID: MGYG000003403_21_81
Type: STP
Location: 100464 - 100895 (-)
Type: STP
Location: 100464 - 100895 (-)
Gene ID: MGYG000003403_21_82
Type: CAZyme
Location: 100855 - 101874 (-)
Type: CAZyme
Location: 100855 - 101874 (-)
Gene ID: MGYG000003403_21_83
Type: CAZyme
Location: 101923 - 102672 (-)
Type: CAZyme
Location: 101923 - 102672 (-)
Gene ID: MGYG000003403_21_84
Type: pfam
Location: 102750 - 103643 (+)
Type: pfam
Location: 102750 - 103643 (+)
Gene ID: MGYG000003403_21_85
Type:
Location: 103760 - 104608 (+)
Type:
Location: 103760 - 104608 (+)
Gene ID: MGYG000003403_21_86
Type: TC
Location: 104992 - 107745 (+)
Type: TC
Location: 104992 - 107745 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_AM
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.