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Cluster: MGYG000003403_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003403_19 MGYG000003403_19_52 55735 56379 + GT32
CAZyme MGYG000003403_19 MGYG000003403_19_53 56382 57155 + GT26
CAZyme MGYG000003403_19 MGYG000003403_19_54 57152 58165 + GT2
pfam MGYG000003403_19 MGYG000003403_19_55 58162 59385 + Wzy_C
TC MGYG000003403_19 MGYG000003403_19_56 59538 61700 - 1.B.14.16.4
pfam MGYG000003403_19 MGYG000003403_19_57 61697 62470 - Caps_syn_GfcC_C | Caps_syn_GfcC_N
pfam MGYG000003403_19 MGYG000003403_19_58 62473 63153 - YjbF
TC MGYG000003403_19 MGYG000003403_19_59 63155 64264 - 1.B.18.3.8
Gene ID: MGYG000003403_19_52
Type: CAZyme
Location: 55735 - 56379 (+)
Gene ID: MGYG000003403_19_53
Type: CAZyme
Location: 56382 - 57155 (+)
Gene ID: MGYG000003403_19_54
Type: CAZyme
Location: 57152 - 58165 (+)
Gene ID: MGYG000003403_19_55
Type: pfam
Location: 58162 - 59385 (+)
Gene ID: MGYG000003403_19_56
Type: TC
Location: 59538 - 61700 (-)
Gene ID: MGYG000003403_19_57
Type: pfam
Location: 61697 - 62470 (-)
Gene ID: MGYG000003403_19_58
Type: pfam
Location: 62473 - 63153 (-)
Gene ID: MGYG000003403_19_59
Type: TC
Location: 63155 - 64264 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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