Cluster: MGYG000003403_CGC23
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003403
- CGC Family ID: CGCFAM_02221
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003403_15 | MGYG000003403_15_64 | 75451 | 78069 | - | GH2 |
| pfam | MGYG000003403_15 | MGYG000003403_15_65 | 78161 | 79387 | - | GlcNAc_2-epim |
| STP | MGYG000003403_15 | MGYG000003403_15_66 | 79384 | 80379 | - | PfkB |
| TC | MGYG000003403_15 | MGYG000003403_15_67 | 80387 | 81700 | - | 2.A.1.7.10 |
| TF | MGYG000003403_15 | MGYG000003403_15_68 | 81761 | 82810 | - | LacI |
| CAZyme | MGYG000003403_15 | MGYG000003403_15_69 | 82907 | 85372 | - | GH92 |
Gene ID: MGYG000003403_15_64
Type: CAZyme
Location: 75451 - 78069 (-)
Type: CAZyme
Location: 75451 - 78069 (-)
Gene ID: MGYG000003403_15_65
Type: pfam
Location: 78161 - 79387 (-)
Type: pfam
Location: 78161 - 79387 (-)
Gene ID: MGYG000003403_15_66
Type: STP
Location: 79384 - 80379 (-)
Type: STP
Location: 79384 - 80379 (-)
Gene ID: MGYG000003403_15_67
Type: TC
Location: 80387 - 81700 (-)
Type: TC
Location: 80387 - 81700 (-)
Gene ID: MGYG000003403_15_68
Type: TF
Location: 81761 - 82810 (-)
Type: TF
Location: 81761 - 82810 (-)
Gene ID: MGYG000003403_15_69
Type: CAZyme
Location: 82907 - 85372 (-)
Type: CAZyme
Location: 82907 - 85372 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_AM
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.