Cluster: MGYG000003403_CGC22
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003403
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003403_15 | MGYG000003403_15_10 | 10012 | 11562 | - | 2.A.15.1.3 |
| STP | MGYG000003403_15 | MGYG000003403_15_11 | 11733 | 12323 | + | TetR_N |
| sulfatase | MGYG000003403_15 | MGYG000003403_15_12 | 12362 | 13834 | + | S1_6 |
| CAZyme | MGYG000003403_15 | MGYG000003403_15_13 | 13937 | 15619 | + | AA3_2 |
| TC | MGYG000003403_15 | MGYG000003403_15_14 | 15855 | 17531 | + | 4.C.1.1.4 |
| pfam | MGYG000003403_15 | MGYG000003403_15_15 | 17732 | 18601 | + | ECH_1 | ECH_2 |
| STP | MGYG000003403_15 | MGYG000003403_15_16 | 18614 | 21337 | - | HATPase_c | HisKA | Response_reg |
| TC | MGYG000003403_15 | MGYG000003403_15_17 | 21339 | 22478 | - | 8.A.59.4.2 |
Gene ID: MGYG000003403_15_10
Type: TC
Location: 10012 - 11562 (-)
Type: TC
Location: 10012 - 11562 (-)
Gene ID: MGYG000003403_15_11
Type: STP
Location: 11733 - 12323 (+)
Type: STP
Location: 11733 - 12323 (+)
Gene ID: MGYG000003403_15_12
Type: sulfatase
Location: 12362 - 13834 (+)
Type: sulfatase
Location: 12362 - 13834 (+)
Gene ID: MGYG000003403_15_13
Type: CAZyme
Location: 13937 - 15619 (+)
Type: CAZyme
Location: 13937 - 15619 (+)
Gene ID: MGYG000003403_15_14
Type: TC
Location: 15855 - 17531 (+)
Type: TC
Location: 15855 - 17531 (+)
Gene ID: MGYG000003403_15_15
Type: pfam
Location: 17732 - 18601 (+)
Type: pfam
Location: 17732 - 18601 (+)
Gene ID: MGYG000003403_15_16
Type: STP
Location: 18614 - 21337 (-)
Type: STP
Location: 18614 - 21337 (-)
Gene ID: MGYG000003403_15_17
Type: TC
Location: 21339 - 22478 (-)
Type: TC
Location: 21339 - 22478 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_AM
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.