Cluster: MGYG000003403_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003403
- CGC Family ID: CGCFAM_05668
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003403_12 | MGYG000003403_12_365 | 410088 | 411281 | - | GH5_48 |
| pfam | MGYG000003403_12 | MGYG000003403_12_366 | 411439 | 411846 | - | S4 |
| NULL(UNKNOWN) | MGYG000003403_12 | MGYG000003403_12_367 | 411856 | 412095 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003403_12 | MGYG000003403_12_368 | 412158 | 413630 | + | 2.A.66.1.25 |
Gene ID: MGYG000003403_12_365
Type: CAZyme
Location: 410088 - 411281 (-)
Type: CAZyme
Location: 410088 - 411281 (-)
Gene ID: MGYG000003403_12_366
Type: pfam
Location: 411439 - 411846 (-)
Type: pfam
Location: 411439 - 411846 (-)
Gene ID: MGYG000003403_12_367
Type:
Location: 411856 - 412095 (-)
Type:
Location: 411856 - 412095 (-)
Gene ID: MGYG000003403_12_368
Type: TC
Location: 412158 - 413630 (+)
Type: TC
Location: 412158 - 413630 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_AM
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.