Cluster: MGYG000003403_CGC20
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003403
- CGC Family ID: CGCFAM_10456
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003403_12 | MGYG000003403_12_259 | 280946 | 281944 | + | PL5 |
| pfam | MGYG000003403_12 | MGYG000003403_12_260 | 281955 | 283166 | - | His_Phos_2 | His_Phos_2 |
| TC | MGYG000003403_12 | MGYG000003403_12_261 | 283163 | 284995 | - | 3.A.1.210.11 |
Gene ID: MGYG000003403_12_259
Type: CAZyme
Location: 280946 - 281944 (+)
Type: CAZyme
Location: 280946 - 281944 (+)
Gene ID: MGYG000003403_12_260
Type: pfam
Location: 281955 - 283166 (-)
Type: pfam
Location: 281955 - 283166 (-)
Gene ID: MGYG000003403_12_261
Type: TC
Location: 283163 - 284995 (-)
Type: TC
Location: 283163 - 284995 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_AM
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.