Cluster: MGYG000003403_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003403
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003403_1 | MGYG000003403_1_84 | 84582 | 85586 | - | CE1 |
| TC | MGYG000003403_1 | MGYG000003403_1_85 | 85784 | 87982 | + | 1.B.14.8.2 |
| peptidase | MGYG000003403_1 | MGYG000003403_1_86 | 88015 | 88893 | + | S33.UPW |
| pfam | MGYG000003403_1 | MGYG000003403_1_87 | 88890 | 89366 | + | MaoC_dehydratas | FAS1_DH_region |
| TC | MGYG000003403_1 | MGYG000003403_1_88 | 89403 | 92732 | + | 2.A.21.9.2 |
| TF | MGYG000003403_1 | MGYG000003403_1_89 | 92737 | 93411 | - | GerE |
| TC | MGYG000003403_1 | MGYG000003403_1_90 | 93541 | 95187 | + | 4.C.1.1.7 |
Gene ID: MGYG000003403_1_84
Type: CAZyme
Location: 84582 - 85586 (-)
Type: CAZyme
Location: 84582 - 85586 (-)
Gene ID: MGYG000003403_1_85
Type: TC
Location: 85784 - 87982 (+)
Type: TC
Location: 85784 - 87982 (+)
Gene ID: MGYG000003403_1_86
Type: peptidase
Location: 88015 - 88893 (+)
Type: peptidase
Location: 88015 - 88893 (+)
Gene ID: MGYG000003403_1_87
Type: pfam
Location: 88890 - 89366 (+)
Type: pfam
Location: 88890 - 89366 (+)
Gene ID: MGYG000003403_1_88
Type: TC
Location: 89403 - 92732 (+)
Type: TC
Location: 89403 - 92732 (+)
Gene ID: MGYG000003403_1_89
Type: TF
Location: 92737 - 93411 (-)
Type: TF
Location: 92737 - 93411 (-)
Gene ID: MGYG000003403_1_90
Type: TC
Location: 93541 - 95187 (+)
Type: TC
Location: 93541 - 95187 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_AM
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.